Genotyping data

Genotyping of our first batch of samples was completed in April 2013.  For this project, 2016 Human DNA samples were processed using the Illumina Infinium HumanExome-12v1-1 BeadChip Arrays and following the Infinium HD Assay Ultra protocol.

  • Average Overall Call Rate: 99.95%
  • Average call rate for samples above cut-off (>95%): N/A

Analysis of our second batch of samples was completed in December 2014.  For this project, 14976 Human DNA samples were processed, in 52 batches of 288 samples. Samples were processed with Illumina Infinium HumanCoreExome-12v1-1 BeadChip Arrays following the Infinium HD Assay Ultra protocol.

  • Average Overall Call Rate: 99.76%
  • Average call rate for samples above cut-off (>98%): 99.82%

Another batch of genotyping is being planned by the end of this year. We will update this information when available.

Acknowledgement

We thank the High-Throughput Genomics Group at the Wellcome Trust Centre for Human Genetics (Funded by Wellcome Trust grant reference is 090532/Z/09/Z and MRC Hub grant G0900747 91070) for the generation of genotyping data.